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LOC17882958 monogalactosyldiacylglycerol synthase 2, chloroplastic [ Capsella rubella ]

Gene ID: 17882958, updated on 21-Dec-2023

Summary

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Gene symbol
LOC17882958
Gene description
monogalactosyldiacylglycerol synthase 2, chloroplastic
Locus tag
CARUB_v10000862mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsella rubella
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Genomic context

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See LOC17882958 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Caprub1_0 (GCF_000375325.1) Unplaced Scaffold NW_006238918.1 (6914146..6916350)

NW_006238918.1Genomic Context describing neighboring genes Neighboring gene probable anion transporter 6, chloroplastic Neighboring gene protein SRG1 Neighboring gene SNF2 domain-containing protein CLASSY 2 Neighboring gene LRR receptor-like serine/threonine-protein kinase EFR

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006238918 Unplaced Scaffold Reference Caprub1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
monogalactosyldiacylglycerol synthase 2, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsella rubella Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caprub1_0

Genomic

  1. NW_006238918.1 Reference Caprub1_0

    Range
    6914146..6916350
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006287590.2 → XP_006287652.1  monogalactosyldiacylglycerol synthase 2, chloroplastic

    See identical proteins and their annotated locations for XP_006287652.1

    UniProtKB/TrEMBL
    R0H6T1
    Conserved Domains (3) summary
    PLN02605
    Location:79 → 458
    PLN02605; monogalactosyldiacylglycerol synthase
    pfam06925
    Location:90 → 258
    MGDG_synth; Monogalactosyldiacylglycerol (MGDG) synthase
    cl10013
    Location:251 → 449
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
Nucleotide Protein
Heading Accession and Version

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