U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC17881433 GPI mannosyltransferase 3 [ Capsella rubella ]

Gene ID: 17881433, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC17881433
Gene description
GPI mannosyltransferase 3
Locus tag
CARUB_v10000649mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsella rubella
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC17881433 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Caprub1_0 (GCF_000375325.1) Unplaced Scaffold NW_006238918.1 (4821731..4824972, complement)

NW_006238918.1Genomic Context describing neighboring genes Neighboring gene pyrroline-5-carboxylate reductase Neighboring gene B3 domain-containing protein At3g06220 Neighboring gene UDP-glycosyltransferase 90A1 Neighboring gene cyclic nucleotide-gated ion channel 18

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006238918 Unplaced Scaffold Reference Caprub1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
GPI mannosyltransferase 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Capsella rubella Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caprub1_0

Genomic

  1. NW_006238918.1 Reference Caprub1_0

    Range
    4821731..4824972 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006287381.2 → XP_006287443.1  GPI mannosyltransferase 3 isoform X1

    UniProtKB/TrEMBL
    R0FEL0
    Conserved Domains (1) summary
    cl21590
    Location:1 → 543
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_023780625.1 → XP_023636393.1  GPI mannosyltransferase 3 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases