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Y69A2AR.16 Exportin-4 [ Caenorhabditis elegans ]

Gene ID: 177039, updated on 18-Sep-2024

Summary

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Official Symbol
Y69A2AR.16
Official Full Name
Exportin-4
Primary source
WormBase:WBGene00022087
Locus tag
CELE_Y69A2AR.16
See related
AllianceGenome:WB:WBGene00022087
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable nuclear export signal receptor activity. Predicted to be involved in protein export from nucleus. Predicted to be located in nucleus. Predicted to be part of nuclear pore. Predicted to be active in cytoplasm. Orthologous to human XPO4 (exportin 4). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See Y69A2AR.16 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
17
Sequence:
Chromosome: IV; NC_003282.8 (2497803..2530296)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ATP synthase subunit gamma, mitochondrial Neighboring gene SCP domain-containing protein Neighboring gene ncRNA Neighboring gene G-protein coupled receptors family 1 profile domain-containing protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables nuclear export signal receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables nuclear export signal receptor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in nuclear transport IEA
Inferred from Electronic Annotation
more info
  
involved_in protein export from nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of nuclear pore IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Exportin-4
NP_001294237.1
  • Confirmed by transcript evidence
NP_001368326.1
  • Confirmed by transcript evidence
NP_001368327.1
  • Confirmed by transcript evidence
NP_500216.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    2497803..2530296
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_067815.7 → NP_500216.2  Exportin-4 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_500216.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95XI7

  2. NM_001307308.3 → NP_001294237.1  Exportin-4 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001294237.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    M1ZJV8

  3. NM_001380093.1 → NP_001368326.1  Exportin-4 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    U4PC16

  4. NM_001380094.1 → NP_001368327.1  Exportin-4 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    U4PCF3
Nucleotide Protein
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