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ung-1 Uracil-DNA glycosylase [ Caenorhabditis elegans ]

Gene ID: 176633, updated on 2-Nov-2024

Summary

Official Symbol
ung-1
Official Full Name
Uracil-DNA glycosylase
Primary source
WormBase:WBGene00013241
Locus tag
CELE_Y56A3A.29
See related
AllianceGenome:WB:WBGene00013241
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Enables uracil DNA N-glycosylase activity. Involved in base-excision repair. Located in nucleus. Human ortholog(s) of this gene implicated in dysgammaglobulinemia and immunodeficiency with hyper IgM type 5. Orthologous to human UNG (uracil DNA glycosylase). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See ung-1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
3
Sequence:
Chromosome: III; NC_003281.10 (11971467..11974096, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene DNA topoisomerase 3 Neighboring gene C2H2-type domain-containing protein Neighboring gene SP-RING-type domain-containing protein Neighboring gene SOSS complex subunit A homolog Neighboring gene Pyr_redox_2 domain-containing protein Neighboring gene Exonuclease domain-containing protein

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables uracil DNA N-glycosylase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables uracil DNA N-glycosylase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables uracil DNA N-glycosylase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 
involved_in base-excision repair IDA
Inferred from Direct Assay
more info
PubMed 
involved_in base-excision repair IEA
Inferred from Electronic Annotation
more info
 
involved_in base-excision repair, AP site formation via deaminated base removal IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Uracil-DNA glycosylase
NP_001255148.1
  • Confirmed by transcript evidence
NP_001255149.1
  • Partially confirmed by transcript evidence
NP_499560.1
  • Confirmed by transcript evidence
NP_499561.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    11971467..11974096 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_067159.7NP_499560.1  Uracil-DNA glycosylase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_499560.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    H8ESG8, H8ESG9, Q95Q13, Q9U221
    Conserved Domains (1) summary
    PRK05254
    Location:64279
    PRK05254; uracil-DNA glycosylase; Provisional
  2. NM_067160.7NP_499561.1  Uracil-DNA glycosylase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_499561.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9U221
  3. NM_001268219.3NP_001255148.1  Uracil-DNA glycosylase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255148.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9U221
    Conserved Domains (1) summary
    PRK05254
    Location:20235
    PRK05254; uracil-DNA glycosylase; Provisional
  4. NM_001268220.3NP_001255149.1  Uracil-DNA glycosylase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255149.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9U221