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arrd-4 Arrestin C-terminal-like domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 174540, updated on 2-Nov-2024

Summary

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Official Symbol
arrd-4
Official Full Name
Arrestin C-terminal-like domain-containing protein
Primary source
WormBase:WBGene00014159
Locus tag
CELE_ZK938.2
See related
AllianceGenome:WB:WBGene00014159
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in protein transport. Predicted to be active in cytoplasm. Is expressed in PVQ and ciliated neurons. Orthologous to human ARRDC5 (arrestin domain containing 5). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See arrd-4 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003280.10 (9837009..9838310, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene gluconokinase Neighboring gene ncRNA Neighboring gene Arrestin C-terminal-like domain-containing protein Neighboring gene Arrestin-like N-terminal domain-containing protein Neighboring gene RNase H type-1 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. NeuroPAL: A Multicolor Atlas for Whole-Brain Neuronal Identification in C. elegans. Yemini E, et al. Cell, 2021 Jan 7. PMID 33378642, Free PMC Article
  2. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
  3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in protein transport IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Arrestin C-terminal-like domain-containing protein
NP_496120.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    9837009..9838310 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063719.4 → NP_496120.1  Arrestin C-terminal-like domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496120.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q23672
    Conserved Domains (2) summary
    pfam00339
    Location:8 → 141
    Arrestin_N; Arrestin (or S-antigen), N-terminal domain
    pfam02752
    Location:163 → 310
    Arrestin_C; Arrestin (or S-antigen), C-terminal domain
Nucleotide Protein
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