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B0495.5 Uncharacterized protein [ Caenorhabditis elegans ]

Gene ID: 174243, updated on 2-Nov-2024

Summary

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Official Symbol
B0495.5
Official Full Name
Uncharacterized protein
Primary source
WormBase:WBGene00015204
Locus tag
CELE_B0495.5
See related
AllianceGenome:WB:WBGene00015204
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in carbohydrate metabolic process. Orthologous to human SPATA20 (spermatogenesis associated 20). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See B0495.5 in Genome Data Viewer
Location:
chromosome: II
Exon count:
7
Sequence:
Chromosome: II; NC_003280.10 (7695935..7698494, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Na(+)/H(+) exchanger protein 2 Neighboring gene ncRNA Neighboring gene Protein moa-2 Neighboring gene Cyclin-dependent kinase 11.1 Neighboring gene Putative endoplasmic reticulum metallopeptidase 1-A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Reboul J, et al. Nat Genet, 2003 May. PMID 12679813
  2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
  3. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Uncharacterized protein
NP_495615.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    7695935..7698494 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063214.8 → NP_495615.2  Uncharacterized protein CELE_B0495.5 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495615.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q09214
    Conserved Domains (3) summary
    COG1331
    Location:13 → 729
    YyaL; Uncharacterized conserved protein YyaL, SSP411 family, contains thoiredoxin and six-hairpin glycosidase-like domains [General function prediction only]
    pfam03190
    Location:18 → 180
    Thioredox_DsbH; Protein of unknown function, DUF255
    cl04955
    Location:466 → 566
    LanC_like; Cyclases involved in the biosynthesis of lantibiotics, and similar proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q09214.2

Gene LinkOut

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