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NAGA alpha-N-acetylgalactosaminidase [ Nannochloropsis gaditana CCMP526 ]

Gene ID: 17362008, updated on 17-Feb-2024

Summary

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Gene symbol
NAGA
Gene description
alpha-N-acetylgalactosaminidase
Locus tag
NGA_2115600
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Nannochloropsis gaditana CCMP526 (strain: CCMP526)
Lineage
Eukaryota; Sar; Stramenopiles; Ochrophyta; Eustigmatophyceae; Eustigmatales; Monodopsidaceae; Nannochloropsis
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Genomic context

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See NAGA in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_005803684.1Genomic Context describing neighboring genes Neighboring gene alpha-galactosidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005803684.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft genome sequence and genetic transformation of the oleaginous alga Nannochloropis gaditana. Radakovits R, et al. Nat Commun, 2012 Feb 21. PMID 22353717, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminidase
XP_005855236.1
  • more complete mRNA may be present in Nannochloropsis gaditana CCMP526 transcriptome shotgun assembly BioProject PRJNA157493

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_005803684.1 Reference assembly

    Range
    27294..27520 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005855174.1 → XP_005855236.1  alpha-N-acetylgalactosaminidase, partial [Nannochloropsis gaditana CCMP526]

    See identical proteins and their annotated locations for XP_005855236.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    K8YR24
    Conserved Domains (1) summary
    cl07893
    Location:1 → 75
    AmyAc_family; Alpha amylase catalytic domain family
Nucleotide Protein
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Gene LinkOut

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