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UXS1 UDP-glucuronate decarboxylase [ Nannochloropsis gaditana CCMP526 ]

Gene ID: 17362005, updated on 17-Feb-2024

Summary

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Gene symbol
UXS1
Gene description
UDP-glucuronate decarboxylase
Locus tag
NGA_0160200
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Nannochloropsis gaditana CCMP526 (strain: CCMP526)
Lineage
Eukaryota; Sar; Stramenopiles; Ochrophyta; Eustigmatophyceae; Eustigmatales; Monodopsidaceae; Nannochloropsis
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Genomic context

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See UXS1 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_005803682.1Genomic Context describing neighboring genes Neighboring gene beach domain-containing protein Neighboring gene uncharacterized protein Neighboring gene developmentally regulated g-protein 1 Neighboring gene iron-sulfur protein Neighboring gene developmentally regulated g-protein 1 Neighboring gene peroxiredoxin 5, atypical 2-Cys peroxiredoxin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005803682.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft genome sequence and genetic transformation of the oleaginous alga Nannochloropis gaditana. Radakovits R, et al. Nat Commun, 2012 Feb 21. PMID 22353717, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD+ binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-glucuronate decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-xylose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucuronate decarboxylase
XP_005855230.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_005803682.1 Reference assembly

    Range
    29196..31450 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005855168.1 → XP_005855230.1  UDP-glucuronate decarboxylase [Nannochloropsis gaditana CCMP526]

    See identical proteins and their annotated locations for XP_005855230.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    K8YTX9
    Conserved Domains (3) summary
    cd05230
    Location:163 → 467
    UGD_SDR_e; UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs
    COG0451
    Location:164 → 471
    WcaG; Nucleoside-diphosphate-sugar epimerase [Cell wall/membrane/envelope biogenesis]
    cl21454
    Location:93 → 194
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

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