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PIGM phosphatidylinositol glycan, class M [ Nannochloropsis gaditana CCMP526 ]

Gene ID: 17360011, updated on 17-Feb-2024

Summary

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Gene symbol
PIGM
Gene description
phosphatidylinositol glycan, class M
Locus tag
NGA_0690800
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Nannochloropsis gaditana CCMP526 (strain: CCMP526)
Lineage
Eukaryota; Sar; Stramenopiles; Ochrophyta; Eustigmatophyceae; Eustigmatales; Monodopsidaceae; Nannochloropsis
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Genomic context

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See PIGM in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_005802923.1Genomic Context describing neighboring genes Neighboring gene DnaJ subfamily A member 2-like protein Neighboring gene uncharacterized protein Neighboring gene pentatricopeptide repeat-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005802923.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-mannosyltransferase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol glycan, class M
XP_005852713.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_005802923.1 Reference assembly

    Range
    6239..7820 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005852651.1 → XP_005852713.1  phosphatidylinositol glycan, class M [Nannochloropsis gaditana CCMP526]

    See identical proteins and their annotated locations for XP_005852713.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    K8YZG1, W7TAZ5
    Conserved Domains (1) summary
    cl21590
    Location:14 → 421
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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