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CHLNCDRAFT_133253 hypothetical protein [ Chlorella variabilis ]

Gene ID: 17359605, updated on 28-Dec-2023

Summary

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Gene symbol
CHLNCDRAFT_133253
Gene description
hypothetical protein
Locus tag
CHLNCDRAFT_133253
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Chlorella variabilis (strain: NC64A)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella
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Genomic context

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Location:
chromosome: Unknown
Exon count:
7

NW_005435087.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005435087.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Chlorella variabilis NC64A genome reveals adaptation to photosymbiosis, coevolution with viruses, and cryptic sex. Blanc G, et al. Plant Cell, 2010 Sep. PMID 20852019, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tRNA 2'-phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA splicing, via endonucleolytic cleavage and ligation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_005852138.1
  • similar to tRNA phosphotransferase 1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_005435087.1 Reference assembly

    Range
    1393652..1395172 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005852076.1 → XP_005852138.1  hypothetical protein CHLNCDRAFT_133253 [Chlorella variabilis]

    See identical proteins and their annotated locations for XP_005852138.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E1Z2P9
    Conserved Domains (1) summary
    pfam01885
    Location:29 → 184
    PTS_2-RNA; RNA 2'-phosphotransferase, Tpt1 / KptA family
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases