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CHLNCDRAFT_133227 hypothetical protein [ Chlorella variabilis ]

Gene ID: 17359598, updated on 28-Dec-2023

Summary

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Gene symbol
CHLNCDRAFT_133227
Gene description
hypothetical protein
Locus tag
CHLNCDRAFT_133227
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Chlorella variabilis (strain: NC64A)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella
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Genomic context

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Location:
chromosome: Unknown
Exon count:
10

NW_005435087.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005435087.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Chlorella variabilis NC64A genome reveals adaptation to photosymbiosis, coevolution with viruses, and cryptic sex. Blanc G, et al. Plant Cell, 2010 Sep. PMID 20852019, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_005851790.1
  • similar to unknown protein; expressed

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_005435087.1 Reference assembly

    Range
    1307845..1312408
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005851728.1 → XP_005851790.1  hypothetical protein CHLNCDRAFT_133227 [Chlorella variabilis]

    See identical proteins and their annotated locations for XP_005851790.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E1Z2M9
    Conserved Domains (1) summary
    cl21608
    Location:244 → 440
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
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