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CHLNCDRAFT_56225 hypothetical protein [ Chlorella variabilis ]

Gene ID: 17353622, updated on 18-Sep-2024

Summary

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Gene symbol
CHLNCDRAFT_56225
Gene description
hypothetical protein
Locus tag
CHLNCDRAFT_56225
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Chlorella variabilis (strain: NC64A)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella
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Genomic context

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Location:
chromosome: Unknown
Exon count:
9

NW_005435074.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005435074.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Chlorella variabilis NC64A genome reveals adaptation to photosymbiosis, coevolution with viruses, and cryptic sex. Blanc G, et al. Plant Cell, 2010 Sep. PMID 20852019, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_005846509.1
  • similar to glycosyl transferase, group 1 family protein, expressed; expressed

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_005435074.1 Reference assembly

    Range
    893698..899513 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005846447.1 → XP_005846509.1  hypothetical protein CHLNCDRAFT_56225 [Chlorella variabilis]

    See identical proteins and their annotated locations for XP_005846509.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E1ZIW9
    Conserved Domains (2) summary
    cd03806
    Location:24 → 435
    GT1_ALG11_like; This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown ...
    PLN02949
    Location:25 → 444
    PLN02949; transferase, transferring glycosyl groups
Nucleotide Protein
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