U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CHC_T00008595001 Dolichyl-phosphate-mannose--protein mannosyltransferase, family GT39 [ Chondrus crispus (carragheen) ]

Gene ID: 17325696, updated on 16-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
CHC_T00008595001
Gene description
Dolichyl-phosphate-mannose--protein mannosyltransferase, family GT39
Locus tag
CHC_T00008595001
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Chondrus crispus (strain: Stackhouse)
Lineage
Eukaryota; Rhodophyta; Florideophyceae; Rhodymeniophycidae; Gigartinales; Gigartinaceae; Chondrus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Exon count:
2

NW_005179249.1Genomic Context describing neighboring genes Neighboring gene Adenylyl-sulfate kinase, APSK Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005179249.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida. Collén J, et al. Proc Natl Acad Sci U S A, 2013 Mar 26. PMID 23503846, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
Dolichyl-phosphate-mannose--protein mannosyltransferase, family GT39

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_005179249.1 Reference assembly

    Range
    597208..598916 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005717925.1 → XP_005717982.1  Dolichyl-phosphate-mannose--protein mannosyltransferase, family GT39 [Chondrus crispus]

    See identical proteins and their annotated locations for XP_005717982.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    R7QK41
    Conserved Domains (3) summary
    COG1928
    Location:77 → 532
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
    pfam16192
    Location:338 → 531
    PMT_4TMC; C-terminal four TMM region of protein-O-mannosyltransferase
    cl21590
    Location:77 → 301
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases