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CHC_T00008273001 Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase [ Chondrus crispus (carragheen) ]

Gene ID: 17321377, updated on 16-Nov-2023

Summary

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Gene symbol
CHC_T00008273001
Gene description
Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase
Locus tag
CHC_T00008273001
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Chondrus crispus (strain: Stackhouse)
Lineage
Eukaryota; Rhodophyta; Florideophyceae; Rhodymeniophycidae; Gigartinales; Gigartinaceae; Chondrus
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Genomic context

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Exon count:
1

NW_005179010.1Genomic Context describing neighboring genes Neighboring gene Translation elongation factor 4, mitochondrial Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005179010.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida. Collén J, et al. Proc Natl Acad Sci U S A, 2013 Mar 26. PMID 23503846, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_005179010.1 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005713596.1 → XP_005713653.1  Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase [Chondrus crispus]

    See identical proteins and their annotated locations for XP_005713653.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    R7Q731
    Conserved Domains (3) summary
    cd03788
    Location:128 → 616
    GT1_TPS; Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a ...
    PRK14501
    Location:128 → 1103
    PRK14501; putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
    cl21460
    Location:736 → 1090
    HAD_like; Haloacid Dehalogenase-like Hydrolases
Nucleotide Protein
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