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Vmn1r36 vomeronasal 1 receptor 36 [ Mus musculus (house mouse) ]

Gene ID: 171184, updated on 17-Aug-2024

Summary

Official Symbol
Vmn1r36provided by MGI
Official Full Name
vomeronasal 1 receptor 36provided by MGI
Primary source
MGI:MGI:2159443
See related
Ensembl:ENSMUSG00000115482 AllianceGenome:MGI:2159443
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
V1rc11
Summary
Predicted to enable pheromone binding activity and pheromone receptor activity. Predicted to act upstream of or within response to pheromone. Predicted to be integral component of plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See Vmn1r36 in Genome Data Viewer
Location:
6 C1; 6 30.62 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (66692956..66693873, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (66715972..66716889, complement)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 35 Neighboring gene STARR-seq mESC enhancer starr_16156 Neighboring gene STARR-seq mESC enhancer starr_16157 Neighboring gene predicted gene 6794 Neighboring gene vomeronasal 1 receptor 37 Neighboring gene ATP synthase, H+ transporting, mitochondrial F0 complex, subunit g pseudogene

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables pheromone binding ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables pheromone receptor activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within response to pheromone ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
located_in plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 

General protein information

Preferred Names
vomeronasal 1 receptor 36
Names
vomernasal 1 receptor Vmn1r36
vomeronasal 1 receptor, C11

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_134166.1NP_598927.1  vomeronasal 1 receptor 36

    See identical proteins and their annotated locations for NP_598927.1

    Status: PROVISIONAL

    Source sequence(s)
    AY065467
    Consensus CDS
    CCDS20214.1
    UniProtKB/TrEMBL
    A0A2I3BPT6, Q8R2E3
    Related
    ENSMUSP00000153849.2, ENSMUST00000226635.2
    Conserved Domains (1) summary
    pfam03402
    Location:33293
    V1R; Vomeronasal organ pheromone receptor family, V1R

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    66692956..66693873 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)