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Inpp5j inositol polyphosphate 5-phosphatase J [ Mus musculus (house mouse) ]

Gene ID: 170835, updated on 2-Nov-2024

Summary

Official Symbol
Inpp5jprovided by MGI
Official Full Name
inositol polyphosphate 5-phosphatase Jprovided by MGI
Primary source
MGI:MGI:2158663
See related
Ensembl:ENSMUSG00000034570 AllianceGenome:MGI:2158663
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Pipp; Pib5pa
Summary
Enables phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity. Acts upstream of or within negative regulation of neuron projection development and negative regulation of peptidyl-serine phosphorylation. Located in dendritic shaft; growth cone; and plasma membrane. Is expressed in alimentary system; ear; nervous system; respiratory system; and skeleton. Orthologous to human INPP5J (inositol polyphosphate-5-phosphatase J). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Biased expression in colon adult (RPKM 37.0), frontal lobe adult (RPKM 26.8) and 8 other tissues See more
Orthologs
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Genomic context

See Inpp5j in Genome Data Viewer
Location:
11 A1; 11 2.45 cM
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (3444272..3455521, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (3494272..3505501, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene ring finger protein 185 Neighboring gene RIKEN cDNA 8430429K09 gene Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:3352424-3352533 Neighboring gene predicted gene, 53661 Neighboring gene 39S ribosomal protein L30, mitochondrial pseudogene Neighboring gene phospholipase A2, group III Neighboring gene selenoprotein M Neighboring gene smoothelin Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:3435535-3435644 Neighboring gene STARR-positive B cell enhancer mm9_chr11:3439140-3439441 Neighboring gene predicted gene 11946

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 
  • Targeted (2)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by MGI

Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
PubMed 
located_in dendritic shaft IDA
Inferred from Direct Assay
more info
PubMed 
located_in growth cone IDA
Inferred from Direct Assay
more info
PubMed 
located_in growth cone ISO
Inferred from Sequence Orthology
more info
 
is_active_in neuron projection IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in ruffle IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in ruffle ISO
Inferred from Sequence Orthology
more info
PubMed 
located_in ruffle membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
phosphatidylinositol 4,5-bisphosphate 5-phosphatase A
Names
phosphatidylinositol (4,5) bisphosphate 5-phosphatase, A
phosphatidylinositol 1,3,4,5-tetrakisphosphate 5-phosphatase
phosphatidylinositol 1,4,5-trisphosphate 5-phosphatase
proline-rich inositol polyphosphate 5-phosphatase
NP_766027.2
XP_030101477.1
XP_030101478.1
XP_030101479.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_172439.3NP_766027.2  phosphatidylinositol 4,5-bisphosphate 5-phosphatase A

    See identical proteins and their annotated locations for NP_766027.2

    Status: VALIDATED

    Source sequence(s)
    BC131634, BY235850, BY629401
    Consensus CDS
    CCDS24364.1
    UniProtKB/Swiss-Prot
    P59644, Q3TDM9
    UniProtKB/TrEMBL
    Q3TBW1
    Related
    ENSMUSP00000046625.6, ENSMUST00000044507.12
    Conserved Domains (3) summary
    cd09094
    Location:420727
    INPP5c_INPP5J-like; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of inositol polyphosphate 5-phosphatase J and related proteins
    PHA03247
    Location:50337
    PHA03247; large tegument protein UL36; Provisional
    pfam17751
    Location:738836
    SKICH; SKICH domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    3444272..3455521 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030245617.2XP_030101477.1  phosphatidylinositol 4,5-bisphosphate 5-phosphatase A isoform X1

    UniProtKB/Swiss-Prot
    P59644, Q3TDM9
    UniProtKB/TrEMBL
    Q3TBW1
    Conserved Domains (3) summary
    cd09094
    Location:420727
    INPP5c_INPP5J-like; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of inositol polyphosphate 5-phosphatase J and related proteins
    PHA03247
    Location:50337
    PHA03247; large tegument protein UL36; Provisional
    pfam17751
    Location:738836
    SKICH; SKICH domain
  2. XM_030245618.1XP_030101478.1  phosphatidylinositol 4,5-bisphosphate 5-phosphatase A isoform X1

    UniProtKB/Swiss-Prot
    P59644, Q3TDM9
    UniProtKB/TrEMBL
    Q3TBW1
    Conserved Domains (3) summary
    cd09094
    Location:420727
    INPP5c_INPP5J-like; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of inositol polyphosphate 5-phosphatase J and related proteins
    PHA03247
    Location:50337
    PHA03247; large tegument protein UL36; Provisional
    pfam17751
    Location:738836
    SKICH; SKICH domain
  3. XM_030245619.2XP_030101479.1  phosphatidylinositol 4,5-bisphosphate 5-phosphatase A isoform X2

    UniProtKB/TrEMBL
    A0A075B6D7
    Related
    ENSMUSP00000139302.2, ENSMUST00000154756.2
    Conserved Domains (3) summary
    cd09094
    Location:420727
    INPP5c_INPP5J-like; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of inositol polyphosphate 5-phosphatase J and related proteins
    PHA03247
    Location:50337
    PHA03247; large tegument protein UL36; Provisional
    pfam17751
    Location:738835
    SKICH; SKICH domain

RNA

  1. XR_003949330.2 RNA Sequence

  2. XR_003949331.2 RNA Sequence