U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

COCSUDRAFT_62003 hypothetical protein [ Coccomyxa subellipsoidea C-169 ]

Gene ID: 17042576, updated on 28-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
COCSUDRAFT_62003
Gene description
hypothetical protein
Locus tag
COCSUDRAFT_62003
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Coccomyxa subellipsoidea C-169 (strain: C-169)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Exon count:
21

NW_005178038.1Genomic Context describing neighboring genes Neighboring gene cytochrome b5 Neighboring gene hypothetical protein Neighboring gene FAD/NAD(P)-binding domain-containing protein Neighboring gene kinase-like protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_005178038.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation. Blanc G, et al. Genome Biol, 2012 May 25. PMID 22630137, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine/serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_005178038.1 Reference assembly

    Range
    1036002..1046064 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005649061.1 → XP_005649118.1  hypothetical protein COCSUDRAFT_62003 [Coccomyxa subellipsoidea C-169]

    See identical proteins and their annotated locations for XP_005649118.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    I0Z1Q5
    Conserved Domains (2) summary
    cl02164
    Location:784 → 884
    Utp11; Utp11 protein
    cl21483
    Location:100 → 200
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases