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COCSUDRAFT_47298 hypothetical protein [ Coccomyxa subellipsoidea C-169 ]

Gene ID: 17041441, updated on 28-Dec-2023

Summary

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Gene symbol
COCSUDRAFT_47298
Gene description
hypothetical protein
Locus tag
COCSUDRAFT_47298
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Coccomyxa subellipsoidea C-169 (strain: C-169)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa
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Genomic context

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Exon count:
27

NW_005178036.1Genomic Context describing neighboring genes Neighboring gene DUF21-domain-containing protein Neighboring gene hypothetical protein Neighboring gene catalase-domain-containing protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005178036.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation. Blanc G, et al. Genome Biol, 2012 May 25. PMID 22630137, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_005178036.1 Reference assembly

    Range
    689384..701811
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005647936.1 → XP_005647993.1  hypothetical protein COCSUDRAFT_47298 [Coccomyxa subellipsoidea C-169]

    See identical proteins and their annotated locations for XP_005647993.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    I0YYI0
    Conserved Domains (4) summary
    smart00254
    Location:1220 → 1254
    ShKT; ShK toxin domain
    COG2319
    Location:64 → 509
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:48 → 80
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:163 → 549
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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