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COCSUDRAFT_60232 hypothetical protein [ Coccomyxa subellipsoidea C-169 ]

Gene ID: 17036450, updated on 28-Dec-2023

Summary

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Gene symbol
COCSUDRAFT_60232
Gene description
hypothetical protein
Locus tag
COCSUDRAFT_60232
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Coccomyxa subellipsoidea C-169 (strain: C-169)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Coccomyxaceae; Coccomyxa
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Genomic context

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Exon count:
5

NW_005178020.1Genomic Context describing neighboring genes Neighboring gene Lem3/Cdc50 Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005178020.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation. Blanc G, et al. Genome Biol, 2012 May 25. PMID 22630137, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_005178020.1 Reference assembly

    Range
    741296..744179
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005643052.1 → XP_005643109.1  hypothetical protein COCSUDRAFT_60232 [Coccomyxa subellipsoidea C-169]

    See identical proteins and their annotated locations for XP_005643109.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    I0YJJ6
    Conserved Domains (1) summary
    cl21608
    Location:198 → 376
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
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