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Phi46:3_gp088 endolysin [ Cellulophaga phage phi46:3 ]

Gene ID: 16797367, updated on 8-Jan-2023

Summary

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Gene symbol
Phi46:3_gp088
Gene description
endolysin
Locus tag
Phi46:3_gp088
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cellulophaga phage phi46:3 (strain: phi46:3, nat-host: Cellulophaga baltica NN016046)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Pachyviridae; Bacelvirus; Bacelvirus phi46tres
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Genomic context

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Sequence:
NC_021792.1 (40535..41080)

NC_021792.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021792.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Twelve previously unknown phage genera are ubiquitous in global oceans. Holmfeldt K, et al. Proc Natl Acad Sci U S A, 2013 Jul 30. PMID 23858439, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
endolysin
YP_008241131.1
  • annotation based on sequence similarity to NCBI EGM60524, CDD cl09583, and Pfam PF09374.5

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_021792.1 Reference assembly

    Range
    40535..41080
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_008241131.1 endolysin [Cellulophaga phage phi46:3]

    See identical proteins and their annotated locations for YP_008241131.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    S0A302
    Conserved Domains (2) summary
    pfam05838
    Location:25 → 108
    Glyco_hydro_108; Glycosyl hydrolase 108
    pfam09374
    Location:111 → 172
    PG_binding_3; Predicted Peptidoglycan domain
Nucleotide Protein
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