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PTSG_04625 hypothetical protein [ Salpingoeca rosetta ]

Gene ID: 16075299, updated on 14-Dec-2023

Summary

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Gene symbol
PTSG_04625
Gene description
hypothetical protein
Locus tag
PTSG_04625
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Salpingoeca rosetta (strain: ATCC 50818, culture-collection: ATCC:50818)
Lineage
Eukaryota; Choanoflagellida; Craspedida; Salpingoecidae; Salpingoeca
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Genomic context

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See PTSG_04625 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
7

NW_004754924.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004754924.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mannan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_004754924.1 Reference assembly

    Range
    1514503..1518242
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004994661.1 → XP_004994718.1  uncharacterized protein PTSG_04625 [Salpingoeca rosetta]

    See identical proteins and their annotated locations for XP_004994718.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    F2U7Z1
    Conserved Domains (1) summary
    pfam11051
    Location:187 → 440
    Mannosyl_trans3; Mannosyltransferase putative
Protein Accession Links
GenPept Link UniProtKB Link
EGD72896.1

Gene LinkOut

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Molecular Biology Databases