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cox1 cytochrome c oxidase subunit 1 [ Clathrina clathrus ]

Gene ID: 15332554, updated on 27-Aug-2016

Summary

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Gene symbol
cox1
Gene description
cytochrome c oxidase subunit 1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Clathrina clathrus
Lineage
Eukaryota; Metazoa; Porifera; Calcarea; Calcinea; Clathrinida; Clathrinidae; Clathrina
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Genomic context

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Location:
chromosome: 5
Sequence:
Chromosome: MT5; NC_021113.1 (3428..4849)

Chromosome MT5 - NC_021113.1Genomic Context describing neighboring genes Neighboring gene tRNA-Arg Neighboring gene NADH dehydrogenase subunit 3 Neighboring gene NADH dehydrogenase subunit 2 Neighboring gene ATP synthase F0 subunit 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021113.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mitochondrial DNA of Clathrina clathrus (Calcarea, Calcinea): six linear chromosomes, fragmented rRNAs, tRNA editing, and a novel genetic code. Lavrov DV, et al. Mol Biol Evol, 2013 Apr. PMID 23223758

GeneRIFs: Gene References Into Functions

General protein information

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Names
cytochrome c oxidase subunit 1
YP_007890315.1
  • start codon not determined

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_021113.1 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_007890315.1 cytochrome c oxidase subunit 1, partial (mitochondrion) [Clathrina clathrus]

    See identical proteins and their annotated locations for YP_007890315.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    L0HTE7
    Conserved Domains (2) summary
    pfam00115
    Location:14 → 439
    COX1; Cytochrome C and Quinol oxidase polypeptide I
    cl00275
    Location:10 → 439
    Heme_Cu_Oxidase_I; Heme-copper oxidase subunit I. Heme-copper oxidases are transmembrane protein complexes in the respiratory chains of prokaryotes and mitochondria which catalyze the reduction of O2 and simultaneously pump protons across the membrane. The superfamily is ...
Nucleotide Protein
Heading Accession and Version