U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ACA1_072910 carrier superfamily protein [ Acanthamoeba castellanii str. Neff ]

Gene ID: 14924640, updated on 17-May-2024

Summary

Go to the top of the page Help
Gene symbol
ACA1_072910
Gene description
carrier superfamily protein
Locus tag
ACA1_072910
See related
AmoebaDB:ACA1_072910; VEuPathDB:ACA1_072910
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Acanthamoeba castellanii str. Neff (strain: Neff, culture-collection: ATCC:30010)
Lineage
Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ACA1_072910 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_004457654.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat domain containing protein Neighboring gene RhoGAP domain containing protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_004457654.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome of Acanthamoeba castellanii highlights extensive lateral gene transfer and early evolution of tyrosine kinase signaling. Clarke M, et al. Genome Biol, 2013 Feb 1. PMID 23375108, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
carrier superfamily protein
XP_004353185.1
  • encoded by transcript ACA1_072910A

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_004457654.1 Reference assembly

    Range
    1329397..1330610
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004353133.1 → XP_004353185.1  carrier superfamily protein [Acanthamoeba castellanii str. Neff]

    See identical proteins and their annotated locations for XP_004353185.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    L8HEK6
    Conserved Domains (1) summary
    pfam00153
    Location:18 → 98
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases