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ACA1_081440 Alg14 family oligosaccharide biosynthesis protein [ Acanthamoeba castellanii str. Neff ]

Gene ID: 14923641, updated on 17-May-2024

Summary

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Gene symbol
ACA1_081440
Gene description
Alg14 family oligosaccharide biosynthesis protein
Locus tag
ACA1_081440
See related
AmoebaDB:ACA1_081440; VEuPathDB:ACA1_081440
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Acanthamoeba castellanii str. Neff (strain: Neff, culture-collection: ATCC:30010)
Lineage
Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba
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Genomic context

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See ACA1_081440 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
5

NW_004457632.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene pseudo Neighboring gene carbon-monoxide oxygenase, putative Neighboring gene FHA domain containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004457632.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome of Acanthamoeba castellanii highlights extensive lateral gene transfer and early evolution of tyrosine kinase signaling. Clarke M, et al. Genome Biol, 2013 Feb 1. PMID 23375108, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of UDP-N-acetylglucosamine transferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Alg14 family oligosaccharide biosynthesis protein
XP_004367764.1
  • encoded by transcript ACA1_081440A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_004457632.1 Reference assembly

    Range
    109565..110631 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004367707.1 → XP_004367764.1  Alg14 family oligosaccharide biosynthesis protein [Acanthamoeba castellanii str. Neff]

    See identical proteins and their annotated locations for XP_004367764.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    L8HD51
    Conserved Domains (1) summary
    pfam08660
    Location:52 → 222
    Alg14; Oligosaccharide biosynthesis protein Alg14 like
Nucleotide Protein
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