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ACA1_221070 carrier superfamily protein [ Acanthamoeba castellanii str. Neff ]

Gene ID: 14915610, updated on 17-May-2024

Summary

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Gene symbol
ACA1_221070
Gene description
carrier superfamily protein
Locus tag
ACA1_221070
See related
AmoebaDB:ACA1_221070; VEuPathDB:ACA1_221070
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Acanthamoeba castellanii str. Neff (strain: Neff, culture-collection: ATCC:30010)
Lineage
Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba
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Genomic context

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See ACA1_221070 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
11

NW_004457380.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene leucine rich repeat domain containing protein Neighboring gene LIM domain containing protein Neighboring gene Peptidylprolyl cis-trans isomerase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004457380.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome of Acanthamoeba castellanii highlights extensive lateral gene transfer and early evolution of tyrosine kinase signaling. Clarke M, et al. Genome Biol, 2013 Feb 1. PMID 23375108, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carrier superfamily protein
XP_004337339.1
  • encoded by transcript ACA1_221070A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_004457380.1 Reference assembly

    Range
    990473..992564
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004337291.1 → XP_004337339.1  carrier superfamily protein, partial [Acanthamoeba castellanii str. Neff]

    See identical proteins and their annotated locations for XP_004337339.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    L8GT63
    Conserved Domains (1) summary
    pfam00153
    Location:221 → 314
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
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