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ACA1_391540 phosphatidylinositol:UDPGlcNAc transferase PIG-A, putative [ Acanthamoeba castellanii str. Neff ]

Gene ID: 14915413, updated on 17-May-2024

Summary

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Gene symbol
ACA1_391540
Gene description
phosphatidylinositol:UDPGlcNAc transferase PIG-A, putative
Locus tag
ACA1_391540
See related
AmoebaDB:ACA1_391540; VEuPathDB:ACA1_391540
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Acanthamoeba castellanii str. Neff (strain: Neff, culture-collection: ATCC:30010)
Lineage
Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba
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Genomic context

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See ACA1_391540 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
10

NW_004457372.1Genomic Context describing neighboring genes Neighboring gene SNF7 family protein Neighboring gene uncharacterized protein Neighboring gene Ssl1like protein Neighboring gene Ras guanine nucleotide exchange factor, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004457372.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome of Acanthamoeba castellanii highlights extensive lateral gene transfer and early evolution of tyrosine kinase signaling. Clarke M, et al. Genome Biol, 2013 Feb 1. PMID 23375108, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol:UDPGlcNAc transferase PIG-A, putative
XP_004336796.1
  • encoded by transcript ACA1_391540A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_004457372.1 Reference assembly

    Range
    197957..200480 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004336748.1 → XP_004336796.1  phosphatidylinositol:UDPGlcNAc transferase PIG-A, putative [Acanthamoeba castellanii str. Neff]

    See identical proteins and their annotated locations for XP_004336796.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    L8GQ52
    Conserved Domains (2) summary
    cd03796
    Location:1 → 376
    GT1_PIG-A_like; This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate ...
    COG0438
    Location:1 → 350
    RfaB; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
Heading Accession and Version

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