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gag gag polyprotein [ Bovine immunodeficiency virus ]

Gene ID: 1489970, updated on 21-Jun-2023

Summary

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Gene symbol
gag
Gene description
gag polyprotein
Locus tag
BIVgp1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bovine immunodeficiency virus (isolate: HXB3)
Lineage
Viruses; Retro-transcribing viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Bovine lentivirus group
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Genomic context

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Sequence:
NC_001413.1 (316..1746)

NC_001413.1Genomic Context describing neighboring genes Neighboring gene reverse transcriptase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene envelope polyprotein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001413.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insights into the molecular and biological features of the dUTPase-related gene of bovine immunodeficiency virus. Podolny Y, et al. Virology, 2017 Jun. PMID 28342388
  2. Nucleotide sequence and genome organization of biologically active proviruses of the bovine immunodeficiency-like virus. Garvey KJ, et al. Virology, 1990 Apr. PMID 2183467

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. dUTPase plays a critical role in retroviral replication at steps that take place after viral cDNA synthesis and integration.
    Title: Insights into the molecular and biological features of the dUTPase-related gene of bovine immunodeficiency virus.
Submit: New GeneRIF Correction

General protein information

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Preferred Names
gag polyprotein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001413.1 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_040562.1 gag polyprotein [Bovine immunodeficiency virus]

    See identical proteins and their annotated locations for NP_040562.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P19558, P19559, Q65590
    Conserved Domains (2) summary
    smart00343
    Location:422 → 438
    ZnF_C2HC; zinc finger
    pfam00607
    Location:203 → 364
    Gag_p24; gag gene protein p24 (core nucleocapsid protein)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
2021382A.1

Gene LinkOut

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