U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

tpsA glycosyltransferase [ Cavenderia fasciculata ]

Gene ID: 14876929, updated on 28-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
tpsA
Gene description
glycosyltransferase
Locus tag
DFA_03630
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cavenderia fasciculata (isolate: SH3)
Lineage
Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Acytosteliales; Cavenderiaceae; Cavenderia
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See tpsA in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_004457737.1Genomic Context describing neighboring genes Neighboring gene transforming acidic coiled-coil-containing protein Neighboring gene G-protein-coupled receptor family protein Neighboring gene WD40-like domain-containing protein Neighboring gene beta-N-acetylhexosaminidase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_004457737.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of alpha,alpha-trehalose-phosphate synthase complex (UDP-forming) IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
glycosyltransferase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_004457737.1 Reference assembly

    Range
    2378889..2381545 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004363175.1 → XP_004363232.1  glycosyltransferase [Cavenderia fasciculata]

    See identical proteins and their annotated locations for XP_004363232.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    F4PIF2
    Conserved Domains (3) summary
    cd03788
    Location:33 → 492
    GT1_TPS; Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a ...
    PRK14501
    Location:33 → 747
    PRK14501; putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
    cl21460
    Location:532 → 736
    HAD_like; Haloacid Dehalogenase-like Hydrolases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases