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stt3 oligosaccharyl transferase [ Cavenderia fasciculata ]

Gene ID: 14873229, updated on 28-Dec-2023

Summary

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Gene symbol
stt3
Gene description
oligosaccharyl transferase
Locus tag
DFA_01189
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cavenderia fasciculata (isolate: SH3)
Lineage
Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Acytosteliales; Cavenderiaceae; Cavenderia
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Genomic context

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See stt3 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_004457729.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene derlin-2 Neighboring gene uncharacterized protein Neighboring gene C2 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004457729.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oligosaccharyl transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
oligosaccharyl transferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_004457729.1 Reference assembly

    Range
    2162496..2165072
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004359101.1 → XP_004359158.1  oligosaccharyl transferase [Cavenderia fasciculata]

    See identical proteins and their annotated locations for XP_004359158.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    F4PRA8
    Conserved Domains (2) summary
    COG1287
    Location:30 → 707
    Stt3; Asparagine N-glycosylation enzyme, membrane subunit Stt3 [Posttranslational modification, protein turnover, chaperones]
    pfam02516
    Location:29 → 495
    STT3; Oligosaccharyl transferase STT3 subunit
Nucleotide Protein
Heading Accession and Version

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