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ggtA glycosyltransferase [ Cavenderia fasciculata ]

Gene ID: 14867424, updated on 25-Jan-2024

Summary

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Gene symbol
ggtA
Gene description
glycosyltransferase
Locus tag
DFA_09857
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cavenderia fasciculata (isolate: SH3)
Lineage
Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Acytosteliales; Cavenderiaceae; Cavenderia
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Genomic context

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See ggtA in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_004457639.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene UBX domain-containing protein Neighboring gene putative basic-leucine zipper transcription factor Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004457639.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucose:glycoprotein glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosyltransferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_004457639.1 Reference assembly

    Range
    136201..141322
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004351702.1 → XP_004351754.1  glycosyltransferase [Cavenderia fasciculata]

    See identical proteins and their annotated locations for XP_004351754.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    F4QAX5
    Conserved Domains (2) summary
    cd06432
    Location:1247 → 1494
    GT8_HUGT1_C_like; The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family
    pfam06427
    Location:27 → 1182
    UDP-g_GGTase; UDP-glucose:Glycoprotein Glucosyltransferase
Nucleotide Protein
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