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Gpx5 glutathione peroxidase 5 [ Mus musculus (house mouse) ]

Gene ID: 14780, updated on 2-Nov-2024

Summary

Official Symbol
Gpx5provided by MGI
Official Full Name
glutathione peroxidase 5provided by MGI
Primary source
MGI:MGI:104886
See related
Ensembl:ENSMUSG00000004344 AllianceGenome:MGI:104886
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Arep
Summary
Predicted to enable glutathione peroxidase activity. Acts upstream of or within cellular response to oxidative stress. Located in extracellular space and sperm plasma membrane. Is expressed in several structures, including male reproductive gland or organ and placenta. Orthologous to human GPX5 (glutathione peroxidase 5). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Restricted expression toward genital fat pad adult (RPKM 3445.3) See more
Orthologs
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Genomic context

See Gpx5 in Genome Data Viewer
Location:
13 A3.1; 13 7.73 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (21470599..21476897, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (21286429..21292727, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene nuclear encoded tRNA threonine 4 (anticodon TGT) Neighboring gene nuclear encoded tRNA arginine 2 (anticodon TCG) Neighboring gene STARR-seq mESC enhancer starr_33847 Neighboring gene ribosomal protein L29 pseudogene Neighboring gene glutathione peroxidase 6 Neighboring gene nuclear encoded tRNA threonine 4 (anticodon CGT)

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 
  • Targeted (4)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • MGC124090, MGC124091, MGC124177

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables glutathione peroxidase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables glutathione peroxidase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in cellular oxidant detoxification IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within cellular response to oxidative stress IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 
located_in sperm plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
epididymal secretory glutathione peroxidase
Names
EGLP
GPx-5
GSHPx-5
arMEP24
epididymis-specific glutathione peroxidase-like protein
lysosomal trafficking regulator, long splice form
major androgen-regulated protein
NP_034473.2
XP_011242585.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_010343.2NP_034473.2  epididymal secretory glutathione peroxidase precursor

    See identical proteins and their annotated locations for NP_034473.2

    Status: VALIDATED

    Source sequence(s)
    AK029731, AK033841, BC105648
    Consensus CDS
    CCDS26270.1
    UniProtKB/Swiss-Prot
    E9QK84, P21765
    UniProtKB/TrEMBL
    Q496Q2, Q8CDQ5
    Related
    ENSMUSP00000106117.3, ENSMUST00000110491.9
    Conserved Domains (1) summary
    cd00340
    Location:39211
    GSH_Peroxidase; Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    21470599..21476897 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011244283.3XP_011242585.1  epididymal secretory glutathione peroxidase isoform X1

    Conserved Domains (1) summary
    cl00388
    Location:5698
    Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold