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PithCp081 ORF48b [ Pinus thunbergii (Japanese black pine) ]

Gene ID: 1457675, updated on 30-Jan-2018

Summary

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Gene symbol
PithCp081
Gene description
ORF48b
Locus tag
PithCp081
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Pinus thunbergii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Pinidae; Pinales; Pinaceae; Pinus; Pinus
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Genomic context

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Sequence:
NC_001631.1 (51599..51745, complement)

NC_001631.1Genomic Context describing neighboring genes Neighboring gene ORF25 Neighboring gene photosystem I protein M Neighboring gene tRNA-Ser Neighboring gene ORF57b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001631.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new gene encoding tRNA(Pro) (GGG) is present in the chloroplast genome of black pine: a compilation of 32 tRNA genes from black pine chloroplasts. Tsudzuki J, et al. Curr Genet, 1994 Aug. PMID 8001170
  2. Loss of all ndh genes as determined by sequencing the entire chloroplast genome of the black pine Pinus thunbergii. Wakasugi T, et al. Proc Natl Acad Sci U S A, 1994 Oct 11. PMID 7937893, Free PMC Article
  3. Chloroplast DNA of black pine retains a residual inverted repeat lacking rRNA genes: nucleotide sequences of trnQ, trnK, psbA, trnI and trnH and the absence of rps16. Tsudzuki J, et al. Mol Gen Genet, 1992 Mar. PMID 1557027

GeneRIFs: Gene References Into Functions

General protein information

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Names
ORF48b

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001631.1 Reference assembly

    Range
    51599..51745 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_042427.1 ORF48b (chloroplast) [Pinus thunbergii]

    See identical proteins and their annotated locations for NP_042427.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q36908
Nucleotide Protein
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