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FRMD6-AS1 FRMD6 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 145438, updated on 10-Oct-2023

Summary

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Official Symbol
FRMD6-AS1provided by HGNC
Official Full Name
FRMD6 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:20129
See related
Ensembl:ENSG00000258537 AllianceGenome:HGNC:20129
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C14orf82
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Genomic context

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Location:
14q22.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (51649516..51651744, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (45856429..45858656, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (52116234..52118462, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene FERM domain containing 6 Neighboring gene FRMD6 antisense RNA 2 Neighboring gene RNA, U6 small nuclear 1291, pseudogene Neighboring gene MED14-independent group 3 enhancer GRCh37_chr14:52000910-52002109 Neighboring gene uncharacterized LOC124903415 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8374 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:52117631-52118249 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5737 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5738 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5739 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5740 Neighboring gene RNA, 5S ribosomal pseudogene 385 Neighboring gene RNA, U6 small nuclear 301, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. LncRNA FRMD6-AS1 promotes hepatocellular carcinoma cell migration and stemness by regulating SENP1/HIF-1α axis. Sun W, et al. Pathol Res Pract, 2023 Mar. PMID 36827886
  2. The sequence of the human genome. Venter JC, et al. Science, 2001 Feb 16. PMID 11181995
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. Ota T, et al. Nat Genet, 2004 Jan. PMID 14702039

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. LncRNA FRMD6-AS1 promotes hepatocellular carcinoma cell migration and stemness by regulating SENP1/HIF-1alpha axis.
    Title: LncRNA FRMD6-AS1 promotes hepatocellular carcinoma cell migration and stemness by regulating SENP1/HIF-1α axis.
Submit: New GeneRIF Correction

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Markers

Other Names

  • FRMD6 antisense RNA 1 (non-protein coding)

Clone Names

  • FLJ12375

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_037676.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK022437, BX104826, W44516
    Related
    ENST00000617151.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    51649516..51651744 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    45856429..45858656 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0C7T7.1 GenPept UniProtKB/Swiss-Prot:P0C7T7

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Chemical Information
Molecular Biology Databases
Research Materials
Miscellaneous