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CORT_0D03030 Sim1 adhesin-like protein [ Candida orthopsilosis Co 90-125 ]

Gene ID: 14540616, updated on 21-Dec-2023

Summary

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Gene symbol
CORT_0D03030
Gene description
Sim1 adhesin-like protein
Locus tag
CORT_0D03030
Gene type
protein coding
RNA name
Sim1 adhesin-like protein
RefSeq status
PROVISIONAL
Organism
Candida orthopsilosis Co 90-125 (strain: Co 90-125)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
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Genomic context

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See CORT_0D03030 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_018297.1 (573232..574395)

Chromosome 4 - NC_018297.1Genomic Context describing neighboring genes Neighboring gene transcription factor Neighboring gene Kns1 protein Neighboring gene Atg12 protein Neighboring gene Ybp1 protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_018297.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of the genome of the pathogenic yeast Candida orthopsilosis. Riccombeni A, et al. PLoS One, 2012. PMID 22563396, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in fungal-type cell wall organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in fungal-type cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
Sim1 adhesin-like protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_018297.1 Reference assembly

    Range
    573232..574395
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003869235.1 → XP_003869284.1  Sim1 adhesin-like protein [Candida orthopsilosis Co 90-125]

    See identical proteins and their annotated locations for XP_003869284.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    H8X555
    Conserved Domains (1) summary
    pfam03856
    Location:134 → 374
    SUN; Beta-glucosidase (SUN family)
Nucleotide Protein
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