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CORT_0D06430 Chs8 chitin synthase [ Candida orthopsilosis Co 90-125 ]

Gene ID: 14540525, updated on 26-Jun-2024

Summary

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Gene symbol
CORT_0D06430
Gene description
Chs8 chitin synthase
Locus tag
CORT_0D06430
Gene type
protein coding
RNA name
Chs8 chitin synthase
RefSeq status
PROVISIONAL
Organism
Candida orthopsilosis Co 90-125 (strain: Co 90-125)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
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Genomic context

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See CORT_0D06430 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_018297.1 (1316474..1319533)

Chromosome 4 - NC_018297.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene peptidyl-prolyl cis-trans isomerase Neighboring gene Pma1 plasma membrane H(+)-ATPase Neighboring gene Lys144 transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_018297.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of the genome of the pathogenic yeast Candida orthopsilosis. Riccombeni A, et al. PLoS One, 2012. PMID 22563396, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
Chs8 chitin synthase
XP_003869612.1
  • required for synthesis of long-chitin fibrils

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_018297.1 Reference assembly

    Range
    1316474..1319533
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003869563.1 → XP_003869612.1  Chs8 chitin synthase [Candida orthopsilosis Co 90-125]

    See identical proteins and their annotated locations for XP_003869612.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    H8X5M1
    Conserved Domains (3) summary
    COG1215
    Location:425 → 764
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
    pfam01644
    Location:315 → 476
    Chitin_synth_1; Chitin synthase
    pfam08407
    Location:241 → 314
    Chitin_synth_1N; Chitin synthase N-terminal
Nucleotide Protein
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