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rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA [ Methanocaldococcus jannaschii DSM 2661 ]

Gene ID: 1451926, updated on 23-Apr-2024

Summary

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Gene symbol
rsmA
Gene description
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
Locus tag
MJ_RS05525
Gene type
protein coding
Organism
Methanocaldococcus jannaschii DSM 2661 (strain: DSM 2661, type-material: type strain of Methanocaldococcus jannaschii)
Lineage
Archaea; Euryarchaeota; Methanomada group; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus
Old locus tag
MJ1029; MJ_1029
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Genomic context

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Sequence:
NC_000909.1 (961661..962488)

NC_000909.1Genomic Context describing neighboring genes Neighboring gene nickel-dependent hydrogenase large subunit Neighboring gene DNA topoisomerase VI subunit B Neighboring gene phosphopantetheine adenylyltransferase Neighboring gene AEC family transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000909.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structural and functional divergence within the Dim1/KsgA family of rRNA methyltransferases. Pulicherla N, et al. J Mol Biol, 2009 Sep 4. PMID 19520088, Free PMC Article
  2. The DIM1 gene responsible for the conserved m6(2)Am6(2)A dimethylation in the 3'-terminal loop of 18 S rRNA is essential in yeast. Lafontaine D, et al. J Mol Biol, 1994 Aug 19. PMID 8064863
  3. Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii. Bult CJ, et al. Science, 1996 Aug 23. PMID 8688087

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Results describe the complementarity of archaeal Dim1/KsgA and bacterial KsgA in Saccharomyces cerevisiae.
    Title: Structural and functional divergence within the Dim1/KsgA family of rRNA methyltransferases.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
WP_010870542.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000909.1 Reference assembly

    Range
    961661..962488
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010870542.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA [Methanocaldococcus jannaschii]

    See identical proteins and their annotated locations for WP_010870542.1

    UniProtKB/Swiss-Prot
    Q58435
    Conserved Domains (1) summary
    PRK14896
    Location:2 → 269
    ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q58435.1

Gene LinkOut

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