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trm5b tRNA (guanine(37)-N1)-methyltransferase Trm5b [ Methanocaldococcus jannaschii DSM 2661 ]

Gene ID: 1451772, updated on 22-Oct-2024

Summary

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Gene symbol
trm5b
Gene description
tRNA (guanine(37)-N1)-methyltransferase Trm5b
Locus tag
MJ_RS04720
Gene type
protein coding
Organism
Methanocaldococcus jannaschii DSM 2661 (strain: DSM 2661, type-material: type strain of Methanocaldococcus jannaschii)
Lineage
Archaea; Methanobacteriati; Methanobacteriota; Methanomada group; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus
Old locus tag
MJ0883; MJ_0883
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Genomic context

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Sequence:
NC_000909.1 (808396..809406)

NC_000909.1Genomic Context describing neighboring genes Neighboring gene ornithine carbamoyltransferase Neighboring gene class I SAM-dependent methyltransferase Neighboring gene pseudo Neighboring gene replication factor C large subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000909.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mechanism of N-methylation by the tRNA m1G37 methyltransferase Trm5. Christian T, et al. RNA, 2010 Dec. PMID 20980671, Free PMC Article
  2. Tertiary structure checkpoint at anticodon loop modification in tRNA functional maturation. Goto-Ito S, et al. Nat Struct Mol Biol, 2009 Oct. PMID 19749755
  3. Crystal structure of archaeal tRNA(m(1)G37)methyltransferase aTrm5. Goto-Ito S, et al. Proteins, 2008 Sep. PMID 18384044
  4. Catalysis by the second class of tRNA(m1G37) methyl transferase requires a conserved proline. Christian T, et al. Biochemistry, 2006 Jun 20. PMID 16768442, Free PMC Article
  5. Distinct origins of tRNA(m1G37) methyltransferase. Christian T, et al. J Mol Biol, 2004 Jun 11. PMID 15165845

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
tRNA (guanine(37)-N1)-methyltransferase Trm5b
WP_010870397.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000909.1 Reference assembly

    Range
    808396..809406
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010870397.1 tRNA (guanine(37)-N1)-methyltransferase Trm5b [Methanocaldococcus jannaschii]

    See identical proteins and their annotated locations for WP_010870397.1

    UniProtKB/Swiss-Prot
    Q58293
    UniProtKB/TrEMBL
    A0A832SY70
    Conserved Domains (1) summary
    COG2520
    Location:1 → 335
    Trm5; tRNA G37 N-methylase Trm5 [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q58293.1

Gene LinkOut

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