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cob apocytochrome b [ Phlebia radiata ]

Gene ID: 14469554, updated on 27-Aug-2016

Summary

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Gene symbol
cob
Gene description
apocytochrome b
Locus tag
PRA_mt0163
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Phlebia radiata (strain: 79)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Corticiales; Corticiaceae; Phlebia
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Genomic context

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Sequence:
Chromosome: MT; NC_020148.1 (119244..126306, complement)

Chromosome MT - NC_020148.1Genomic Context describing neighboring genes Neighboring gene tRNA-Gly Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene NADH dehydrogenase subunit 4 Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_020148.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mitochondrial genome of Phlebia radiata is the second largest (156 kbp) among fungi and features signs of genome flexibility and recent recombination events. Salavirta H, et al. PLoS One, 2014. PMID 24824642, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Miscellaneous features

  • Loc: c120622-<120086 LAGLIDADG_2 domain inference = alignment
  • Loc: c122072-121671 Type II intron maturase domain inference = alignment
  • Loc: c122927-122136 Reverse transcriptase (RNA-dependent DNA polymerase) domain inference = alignment
  • Loc: c125219-<125082 LAGLIDADG_1 domain inference = alignment
  • Loc: c125397-<125284 LAGLIDADG_1 domain inference = alignment
  • Loc: c125813-<125541 LAGLIDADG_1 domain inference = alignment

General protein information

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Names
apocytochrome b
YP_007374948.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_020148.1 Reference assembly

    Range
    119244..126306 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_007374948.1 apocytochrome b (mitochondrion) [Phlebia radiata]

    See identical proteins and their annotated locations for YP_007374948.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    L8B9B4
    Conserved Domains (3) summary
    MTH00156
    Location:10 → 366
    CYTB; cytochrome b; Provisional
    cd00284
    Location:8 → 207
    Cytochrome_b_N; Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, ...
    pfam00032
    Location:259 → 360
    Cytochrom_B_C; Cytochrome b(C-terminal)/b6/petD
Nucleotide Protein
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