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PH_RS00925 carbohydrate ABC transporter permease [ Pyrococcus horikoshii OT3 ]

Gene ID: 1444094, updated on 22-Oct-2024

Summary

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Gene symbol
PH_RS00925
Gene description
carbohydrate ABC transporter permease
Locus tag
PH_RS00925
Gene type
protein coding
Organism
Pyrococcus horikoshii OT3 (strain: OT3, type-material: type strain of Pyrococcus horikoshii)
Lineage
Archaea; Methanobacteriati; Methanobacteriota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus
Old locus tag
PH0205
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Genomic context

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Sequence:
NC_000961.1 (179290..180228, complement)

NC_000961.1Genomic Context describing neighboring genes Neighboring gene ABC transporter ATP-binding protein Neighboring gene carbohydrate ABC transporter permease Neighboring gene extracellular solute-binding protein Neighboring gene PLP-dependent aminotransferase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000961.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3. Kawarabayasi Y, et al. DNA Res, 1998 Apr 30. PMID 9679194
  2. Learning the ABCs one at a time: structure and mechanism of ABC transporters. Ford RC, et al. Biochem Soc Trans, 2019 Feb 28. PMID 30626703
  3. Structure and mechanism of ABC transporters. Wilkens S. F1000Prime Rep, 2015. PMID 25750732, Free PMC Article
  4. Structural diversity of ABC transporters. ter Beek J, et al. J Gen Physiol, 2014 Apr. PMID 24638992, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
carbohydrate ABC transporter permease

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000961.1 Reference assembly

    Range
    179290..180228 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010884312.1 carbohydrate ABC transporter permease [Pyrococcus horikoshii]

    See identical proteins and their annotated locations for WP_010884312.1

    UniProtKB/TrEMBL
    A0A832SY40, O57944
    Conserved Domains (2) summary
    COG0395
    Location:1 → 286
    UgpE; ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism]
    COG1175
    Location:1 → 304
    UgpA; ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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