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PH_RS00920 carbohydrate ABC transporter permease [ Pyrococcus horikoshii OT3 ]

Gene ID: 1444093, updated on 22-Oct-2024

Summary

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Gene symbol
PH_RS00920
Gene description
carbohydrate ABC transporter permease
Locus tag
PH_RS00920
Gene type
protein coding
Organism
Pyrococcus horikoshii OT3 (strain: OT3, type-material: type strain of Pyrococcus horikoshii)
Lineage
Archaea; Methanobacteriati; Methanobacteriota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus
Old locus tag
PH0204
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Genomic context

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Sequence:
NC_000961.1 (178421..179290, complement)

NC_000961.1Genomic Context describing neighboring genes Neighboring gene proteasome-activating nucleotidase Neighboring gene ABC transporter ATP-binding protein Neighboring gene carbohydrate ABC transporter permease Neighboring gene extracellular solute-binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000961.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3. Kawarabayasi Y, et al. DNA Res, 1998 Apr 30. PMID 9679194
  2. Mechanistic diversity in ATP-binding cassette (ABC) transporters. Locher KP. Nat Struct Mol Biol, 2016 Jun 7. PMID 27273632
  3. ABC transporters: the power to change. Rees DC, et al. Nat Rev Mol Cell Biol, 2009 Mar. PMID 19234479, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
carbohydrate ABC transporter permease

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000961.1 Reference assembly

    Range
    178421..179290 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010884311.1 carbohydrate ABC transporter permease [Pyrococcus horikoshii]

    See identical proteins and their annotated locations for WP_010884311.1

    UniProtKB/TrEMBL
    A0A832T6L0, O57943
    Conserved Domains (2) summary
    COG0395
    Location:13 → 286
    UgpE; ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism]
    cl00427
    Location:19 → 289
    TM_PBP2; Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and ...
Nucleotide Protein
Heading Accession and Version

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