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speB agmatinase [ Pyrococcus horikoshii OT3 ]

Gene ID: 1443985, updated on 12-Feb-2024

Summary

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Gene symbol
speB
Gene description
agmatinase
Locus tag
PH_RS00405
Gene type
protein coding
Organism
Pyrococcus horikoshii OT3 (strain: OT3, type-material: type strain of Pyrococcus horikoshii)
Lineage
Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus
Old locus tag
PH0083
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Genomic context

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Sequence:
NC_000961.1 (69041..69892)

NC_000961.1Genomic Context describing neighboring genes Neighboring gene molybdopterin-guanine dinucleotide biosynthesis protein B Neighboring gene LSm family protein Neighboring gene class I fructose-bisphosphate aldolase Neighboring gene THUMP domain-containing protein Neighboring gene 7-cyano-7-deazaguanine synthase QueC Neighboring gene TrmB family transcriptional regulator sugar-binding domain-containing protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000961.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The first archaeal agmatinase from anaerobic hyperthermophilic archaeon Pyrococcus horikoshii: cloning, expression, and characterization. Goda S, et al. Biochim Biophys Acta, 2005 Apr 15. PMID 15752699
  2. Phylogeny of related functions: the case of polyamine biosynthetic enzymes. Sekowska A, et al. Microbiology (Reading), 2000 Aug. PMID 10931887
  3. Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3. Kawarabayasi Y, et al. DNA Res, 1998 Apr 30. PMID 9679194

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. isolation and characteristics of agmatinase from the hyperthermophilic archaeon Pyrococcus horikoshii; first description of the presence of archaeal agmatinase and its characteristics
    Title: The first archaeal agmatinase from anaerobic hyperthermophilic archaeon Pyrococcus horikoshii: cloning, expression, and characterization.
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General gene information

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Homology

General protein information

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Preferred Names
agmatinase
WP_010884203.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000961.1 Reference assembly

    Range
    69041..69892
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010884203.1 agmatinase [Pyrococcus horikoshii]

    UniProtKB/Swiss-Prot
    O57839
    UniProtKB/TrEMBL
    A0A832SND7
    Conserved Domains (1) summary
    cd11593
    Location:23 → 278
    Agmatinase-like_2; Agmatinase and related proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O57839.1

Gene LinkOut

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