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NATPE_RS03045 IS4-like element ISH32 family transposase [ Natrinema pellirubrum DSM 15624 ]

Gene ID: 14335086, updated on 22-Oct-2024

Summary

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Gene symbol
NATPE_RS03045
Gene description
IS4-like element ISH32 family transposase
Locus tag
NATPE_RS03045
Gene type
protein coding
Organism
Natrinema pellirubrum DSM 15624 (strain: DSM 15624, nat-host: fish, culture-collection: DSM:15624, type-material: type strain of Natrinema pellirubrum)
Lineage
Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Halobacteria; Halobacteriales; Natrialbaceae; Natrinema
Old locus tag
Natpe_0627
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Genomic context

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Sequence:
NC_019962.1 (623808..625142, complement)

NC_019962.1Genomic Context describing neighboring genes Neighboring gene excinuclease ABC subunit UvrA Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene cold-shock protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_019962.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Exploring bacterial insertion sequences with ISfinder: objectives, uses, and future developments. Siguier P, et al. Methods Mol Biol, 2012. PMID 22367867

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
IS4-like element ISH32 family transposase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_019962.1 Reference assembly

    Range
    623808..625142 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_012289608.1 MULTISPECIES: IS4-like element ISH32 family transposase [Halobacteriales]

    See identical proteins and their annotated locations for WP_012289608.1

    UniProtKB/TrEMBL
    A0A4D6GW63, A0A510NAU0, B0R9J9, L0JT90
    Conserved Domains (1) summary
    NF033592
    Location:17 → 360
    transpos_IS4_1; IS4 family transposase
Nucleotide Protein
Heading Accession and Version