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Gm14288 predicted gene 14288 [ Mus musculus (house mouse) ]

Gene ID: 13999, updated on 2-Nov-2024

Summary

Official Symbol
Gm14288provided by MGI
Official Full Name
predicted gene 14288provided by MGI
Primary source
MGI:MGI:3706570
See related
Ensembl:ENSMUSG00000078889 AllianceGenome:MGI:3706570
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Orthologous to human ZNF788P (zinc finger family member 788, pseudogene). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in bladder adult (RPKM 7.5), cerebellum adult (RPKM 5.9) and 25 other tissues See more
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Genomic context

See Gm14288 in Genome Data Viewer
Location:
2 H4; 2 98.68 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (175584105..175592831, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (175790548..175801038, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene 2007 Neighboring gene predicted gene, 57829 Neighboring gene ribosomal protein S8, pseudogene 2 Neighboring gene zinc finger protein 937 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC13999

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033123.3NP_001028295.2  uncharacterized protein LOC13999

    See identical proteins and their annotated locations for NP_001028295.2

    Status: VALIDATED

    Source sequence(s)
    BC086907
    Consensus CDS
    CCDS50822.1
    UniProtKB/TrEMBL
    A2ARV8, A2BDM8
    Related
    ENSMUSP00000104648.3, ENSMUST00000109020.9
    Conserved Domains (1) summary
    pfam01352
    Location:443
    KRAB; KRAB box

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    175584105..175592831 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)