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KAFR0E00500 hypothetical protein [ Kazachstania africana CBS 2517 ]

Gene ID: 13882681, updated on 26-Jun-2024

Summary

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Gene symbol
KAFR0E00500
Gene description
hypothetical protein
Locus tag
KAFR_0E00500
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Kazachstania africana CBS 2517 (strain: type strain:CBS 2517)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Kazachstania
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Genomic context

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See KAFR0E00500 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_018944.1 (109532..110830)

Chromosome 5 - NC_018944.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_018944.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Gordon JL, et al. Proc Natl Acad Sci U S A, 2011 Dec 13. PMID 22123960, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fungal-type cell wall organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in fungal-type cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_003957339.1
  • similar to Saccharomyces cerevisiae UTR2 (YEL040W); ancestral locus Anc_1.483

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_018944.1 Reference assembly

    Range
    109532..110830
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003957290.1 → XP_003957339.1  hypothetical protein KAFR_0E00500 [Kazachstania africana CBS 2517]

    See identical proteins and their annotated locations for XP_003957339.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    H2AV04
    Conserved Domains (2) summary
    cd02183
    Location:87 → 299
    GH16_fungal_CRH1_transglycosylase; glycosylphosphatidylinositol-glucanosyltransferase
    cl16916
    Location:23 → 67
    ChtBD1; Hevein or type 1 chitin binding domain
Nucleotide Protein
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