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LRTM1 leucine rich repeats and transmembrane domains 1 [ Capricornis sumatraensis (Sumatran serow) ]

Gene ID: 138087261, updated on 9-Oct-2024

Summary

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Gene symbol
LRTM1
Gene description
leucine rich repeats and transmembrane domains 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Capricornis sumatraensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capricornis
Orthologs
human mouse all
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Genomic context

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See LRTM1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_10 current serow.2 (GCF_032405125.1) 10 NC_091078.1 (91650412..91695860)

Chromosome 10 - NC_091078.1Genomic Context describing neighboring genes Neighboring gene ELKS/RAB6-interacting/CAST family member 2 Neighboring gene U5 spliceosomal RNA Neighboring gene Wnt family member 5A Neighboring gene calcium voltage-gated channel auxiliary subunit alpha2delta 3 Neighboring gene U6 spliceosomal RNA Neighboring gene selenoprotein K

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_091078.1 Chromosome 10 Reference serow.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat and transmembrane domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_032405125.1-RS_2024_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference serow.2 Primary Assembly

Genomic

  1. NC_091078.1 Reference serow.2 Primary Assembly

    Range
    91650412..91695860
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068982266.1 → XP_068838367.1  leucine-rich repeat and transmembrane domain-containing protein 1

Nucleotide Protein
Heading Accession and Version

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