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epm2a EPM2A glucan phosphatase, laforin [ Antennarius striatus (striated frogfish) ]

Gene ID: 137613302, updated on 18-Sep-2024

Summary

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Gene symbol
epm2a
Gene description
EPM2A glucan phosphatase, laforin
Gene type
protein coding
RefSeq status
MODEL
Organism
Antennarius striatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Lophiiformes; Antennarioidei; Antennariidae; Antennarius
Orthologs
human zebrafish all
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Genomic context

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See epm2a in Genome Data Viewer
Location:
chromosome: 19
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_09 current ASM4005453v1 (GCF_040054535.1) 19 NC_090794.1 (15525633..15541802)

Chromosome 19 - NC_090794.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137613902 Neighboring gene uncharacterized LOC137613665 Neighboring gene utrophin Neighboring gene transfer RNA leucine (anticodon UAA)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_090794.1 Chromosome 19 Reference ASM4005453v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 2-oxoglutarate-dependent dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine/serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables starch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laforin; probable RNA-directed DNA polymerase from transposon BS

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040054535.1-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM4005453v1

Genomic

  1. NC_090794.1 Reference ASM4005453v1

    Range
    15525633..15541802
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068342400.1 → XP_068198501.1  laforin isoform X1

  2. XM_068342402.1 → XP_068198503.1  probable RNA-directed DNA polymerase from transposon BS isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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