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PPP1R16B protein phosphatase 1 regulatory subunit 16B [ Pseudorca crassidens (false killer whale) ]

Gene ID: 137207829, updated on 28-Aug-2024

Summary

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Gene symbol
PPP1R16B
Gene description
protein phosphatase 1 regulatory subunit 16B
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudorca crassidens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Pseudorca
Orthologs
human mouse all
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Genomic context

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See PPP1R16B in Genome Data Viewer
Location:
chromosome: 15
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_08 current mPseCra1.hap1 (GCF_039906515.1) 15 NC_090310.1 (68547037..68649798)

Chromosome 15 - NC_090310.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 32 member 1 Neighboring gene actin related protein 5 Neighboring gene family with sequence similarity 83 member D Neighboring gene small nucleolar RNA U109

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_090310.1 Chromosome 15 Reference mPseCra1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables enzyme inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables myosin phosphatase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in establishment of endothelial barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of sprouting angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein phosphatase 1 regulatory inhibitor subunit 16B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_039906515.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPseCra1.hap1

Genomic

  1. NC_090310.1 Reference mPseCra1.hap1

    Range
    68547037..68649798
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067708130.1 → XP_067564231.1  protein phosphatase 1 regulatory inhibitor subunit 16B

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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