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pla1a phospholipase A1 member A [ Channa argus (northern snakehead) ]

Gene ID: 137132692, updated on 23-Sep-2024

Summary

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Gene symbol
pla1a
Gene description
phospholipase A1 member A
Locus tag
Q8A73_009680
Gene type
protein coding
RefSeq status
MODEL
Organism
Channa argus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Channoidei; Channidae; Channa
Orthologs
human zebrafish all
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Genomic context

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See pla1a in Genome Data Viewer
Location:
chromosome: 9
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_08 current Channa argus male v1.0 (GCF_033026475.1) 9 NC_090205.1 (7385871..7396196)

Chromosome 9 - NC_090205.1Genomic Context describing neighboring genes Neighboring gene kelch-like protein 9 Neighboring gene hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 Neighboring gene popeye domain cAMP effector 2 Neighboring gene cytochrome c oxidase copper chaperone COX17

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_090205.1 Chromosome 9 Reference Channa argus male v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipoprotein lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipase A1 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_033026475.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Channa argus male v1.0 Primary Assembly

Genomic

  1. NC_090205.1 Reference Channa argus male v1.0 Primary Assembly

    Range
    7385871..7396196
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067515523.1 → XP_067371624.1  phospholipase A1 member A isoform X3

  2. XM_067515521.1 → XP_067371622.1  phospholipase A1 member A isoform X1

  3. XM_067515522.1 → XP_067371623.1  phospholipase A1 member A isoform X2

Nucleotide Protein
Heading Accession and Version

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