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pla2g12a phospholipase A2, group XIIA [ Channa argus (northern snakehead) ]

Gene ID: 137123474, updated on 23-Sep-2024

Summary

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Gene symbol
pla2g12a
Gene description
phospholipase A2, group XIIA
Locus tag
Q8A73_003238
Gene type
protein coding
RefSeq status
MODEL
Organism
Channa argus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Channoidei; Channidae; Channa
Orthologs
human zebrafish all
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Genomic context

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See pla2g12a in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current Channa argus male v1.0 (GCF_033026475.1) 3 NC_090199.1 (12202801..12206134)

Chromosome 3 - NC_090199.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat protein 39B-like Neighboring gene DnaJ heat shock protein family (Hsp40) member B14 Neighboring gene caspase-6-like Neighboring gene calcium uniporter regulatory subunit MCUb, mitochondrial-like Neighboring gene lymphoid enhancer-binding factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_090199.1 Chromosome 3 Reference Channa argus male v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arachidonate secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
group XIIA secretory phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_033026475.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Channa argus male v1.0 Primary Assembly

Genomic

  1. NC_090199.1 Reference Channa argus male v1.0 Primary Assembly

    Range
    12202801..12206134
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067497219.1 → XP_067353320.1  group XIIA secretory phospholipase A2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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