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nr3c2 nuclear receptor subfamily 3, group C, member 2 [ Channa argus (northern snakehead) ]

Gene ID: 137123191, updated on 23-Sep-2024

Summary

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Gene symbol
nr3c2
Gene description
nuclear receptor subfamily 3, group C, member 2
Locus tag
Q8A73_003191
Gene type
protein coding
RefSeq status
MODEL
Organism
Channa argus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Channoidei; Channidae; Channa
Orthologs
human zebrafish all
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Genomic context

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See nr3c2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_08 current Channa argus male v1.0 (GCF_033026475.1) 3 NC_090199.1 (10479677..10554107)

Chromosome 3 - NC_090199.1Genomic Context describing neighboring genes Neighboring gene LPS-responsive vesicle trafficking, beach and anchor containing Neighboring gene mab-21-like 2 Neighboring gene doublecortin-like kinase 2a Neighboring gene Rho GTPase activating protein 10 Neighboring gene transmembrane protein 184C Neighboring gene protein arginine methyltransferase 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_090199.1 Chromosome 3 Reference Channa argus male v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables estrogen response element binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear receptor-mediated steroid hormone signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mineralocorticoid receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_033026475.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Channa argus male v1.0 Primary Assembly

Genomic

  1. NC_090199.1 Reference Channa argus male v1.0 Primary Assembly

    Range
    10479677..10554107
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067496554.1 → XP_067352655.1  mineralocorticoid receptor isoform X3

  2. XM_067496553.1 → XP_067352654.1  mineralocorticoid receptor isoform X2

  3. XM_067496550.1 → XP_067352651.1  mineralocorticoid receptor isoform X1

  4. XM_067496551.1 → XP_067352652.1  mineralocorticoid receptor isoform X1

Nucleotide Protein
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